Details for gene set NCI_GLYPICAN 3 NETWORK[GSEA]

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB_repos
Phenotype	phenotype_transDMpreB_versus_DMpreB.cls#transDMpreB_versus_DMpreB_repos
Upregulated in class	transDMpreB
GeneSet	NCI_GLYPICAN 3 NETWORK
Enrichment Score (ES)	0.7393919
Normalized Enrichment Score (NES)	1.5773231
Nominal p-value	0.0057361377
FDR q-value	0.82917523
FWER p-Value	0.896

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	AXIN1	1579 23330	18	2.123	0.2818	Yes
2	MAP3K7IP1	2193 2171 22419	59	1.517	0.4818	Yes
3	GNAS	9025 2963 2752	376	0.559	0.5392	Yes
4	CREBBP	22682 8783	416	0.525	0.6070	Yes
5	CCND1	4487 4488 8707 17535	581	0.427	0.6550	Yes
6	TCF4	5642	583	0.424	0.7115	Yes
7	NLK	5179 5178	838	0.311	0.7392	Yes
8	MAP3K7	16255	1335	0.182	0.7368	Yes
9	GNG2	4790	1631	0.139	0.7394	Yes
10	DVL1	2412 15960	2550	0.053	0.6970	No
11	LRP6	9286	2551	0.053	0.7040	No
12	CAMK2A	2024 23541 1980	2597	0.051	0.7084	No
13	PPP2R5D	962 1523 22957 10139	2630	0.049	0.7132	No
14	AXIN2	20618	2667	0.048	0.7176	No
15	WNT1	22371	3341	0.028	0.6851	No
16	TLE1	5765 10185 15859	4007	0.018	0.6517	No
17	MAPK9	1233 20903 1383	4118	0.017	0.6480	No
18	MYC	22465 9435	4133	0.017	0.6494	No
19	WNT5A	22066 5880	4541	0.013	0.6292	No
20	MACF1	4316 15763 2382 15764	5115	0.010	0.5996	No
21	CTBP1	16566	5423	0.008	0.5842	No
22	PLCG1	14753	5548	0.008	0.5786	No
23	WNT11	5876	5684	0.007	0.5723	No
24	CDC42	4503 8722 4504 2465	5905	0.007	0.5613	No
25	PTCH1	5304	6544	0.005	0.5276	No
26	DKK1	23700	6625	0.005	0.5239	No
27	WNT4	16025	6898	0.004	0.5097	No
28	LEF1	1860 15420	7191	0.003	0.4944	No
29	NFATC2	5168 2866	7583	0.002	0.4736	No
30	NKD1	8228	7868	0.002	0.4585	No
31	FZD3	21784	8019	0.001	0.4506	No
32	GSK3A	405	8181	0.001	0.4421	No
33	FZD1	16923	8227	0.001	0.4398	No
34	DKK2	15418	8555	0.000	0.4222	No
35	FGF7	8965	8584	0.000	0.4207	No
36	RAN	5356 9691	9464	-0.002	0.3736	No
37	TCF3	17114	9558	-0.002	0.3688	No
38	SHH	16581	9614	-0.002	0.3661	No
39	AES	19925 478	9970	-0.003	0.3474	No
40	BMP4	21863	10148	-0.003	0.3383	No
41	FBXW11	20926	10329	-0.004	0.3291	No
42	CSNK2A1	14797	10540	-0.004	0.3183	No
43	FURIN	9538	10584	-0.004	0.3166	No
44	CSNK1A1	8204	11164	-0.006	0.2862	No
45	YES1	5930	11364	-0.006	0.2763	No
46	GPC3	24151	12569	-0.011	0.2129	No
47	KREMEN2	23104	12838	-0.013	0.2002	No
48	WNT6	5881	13475	-0.017	0.1682	No
49	WIF1	19866	13853	-0.021	0.1507	No
50	GSK3B	22761	14935	-0.040	0.0977	No
51	FZD6	22486	15177	-0.046	0.0908	No
52	APC	4396 2022	15406	-0.053	0.0856	No
53	SMAD4	5058	16259	-0.096	0.0525	No
54	GNB1	15967	16431	-0.109	0.0578	No
55	MAPK8	6459	16496	-0.113	0.0693	No
56	FRAT1	3681 23856	16898	-0.154	0.0682	No
57	HDAC1	9081	17174	-0.183	0.0777	No